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This seems to be a problem that has been popping up quite often with Big Sur. The mentioned solutions for checking the symbolic link for the MacOS.sdk don't seem to solve my problem. I'm trying to build a c++ module for python using a setup.py script. Running in verbose my command line shows: running build running build_ext building 'pparser' extension Compiling with an SDK that doesn't seem to exist:  /Library/Developer/CommandLineTools/SDKs/MacOSX11.3.sdk Please check your Xcode installation clang -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -I/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include -I/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include -I/Users/john/.pyenv/versions/3.7.9/include/python3.7m -c pparser.cpp -o build/temp.macosx-11.4-x86_64-3.7/pparser.o -Wno-nullability-completeness -Wno-undef-prefix -I/usr/local/opt/flex/include -I/usr/local/opt/bison/include -std=gnu++14 -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX11.3.sdk --verbose Apple clang version 12.0.5 (clang-1205.0.22.11) Target: x86_64-apple-darwin20.5.0 Thread model: posix InstalledDir: /Library/Developer/CommandLineTools/usr/bin clang: warning: no such sysroot directory: ' /Library/Developer/CommandLineTools/SDKs/MacOSX11.3.sdk' [-Wmissing-sysroot] ignoring nonexistent directory " /Library/Developer/CommandLineTools/SDKs/MacOSX11.3.sdk/usr/include/c++/v1"  "/Library/Developer/CommandLineTools/usr/bin/clang" -cc1 -triple x86_64-apple-macosx11.4.0 -Wdeprecated-objc-isa-usage -Werror=deprecated-objc-isa-usage -Werror=implicit-function-declaration -emit-obj -disable-free -disable-llvm-verifier -discard-value-names -main-file-name pparser.cpp -mrelocation-model pic -pic-level 2 -mframe-pointer=all -fno-strict-return -fno-rounding-math -munwind-tables -fcompatibility-qualified-id-block-type-checking -fvisibility-inlines-hidden-static-local-var -target-cpu penryn -debug-info-kind=standalone -dwarf-version=4 -debugger-tuning=lldb -target-linker-version 650.9 -v -resource-dir /Library/Developer/CommandLineTools/usr/lib/clang/12.0.5 -isysroot " /Library/Developer/CommandLineTools/SDKs/MacOSX11.3.sdk" -D NDEBUG -I /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include -I /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include -I /Users/john/.pyenv/versions/3.7.9/include/python3.7m -I /usr/local/opt/flex/include -I /usr/local/opt/bison/include -I/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include -stdlib=libc++ -internal-isystem /Library/Developer/CommandLineTools/usr/bin/../include/c++/v1 -internal-isystem " /Library/Developer/CommandLineTools/SDKs/MacOSX11.3.sdk/usr/local/include" -internal-isystem /Library/Developer/CommandLineTools/usr/lib/clang/12.0.5/include -internal-externc-isystem " /Library/Developer/CommandLineTools/SDKs/MacOSX11.3.sdk/usr/include" -internal-externc-isystem /Library/Developer/CommandLineTools/usr/include -O3 -Wno-unused-result -Wsign-compare -Wunreachable-code -Wall -Wno-nullability-completeness -Wno-undef-prefix -Wno-reorder-init-list -Wno-implicit-int-float-conversion -Wno-c99-designator -Wno-final-dtor-non-final-class -Wno-extra-semi-stmt -Wno-misleading-indentation -Wno-quoted-include-in-framework-header -Wno-implicit-fallthrough -Wno-enum-enum-conversion -Wno-enum-float-conversion -Wno-elaborated-enum-base -std=gnu++14 -fdeprecated-macro -fdebug-compilation-dir /Users/john/Programming/git/Jupyter/Parsers -ferror-limit 19 -fwrapv -stack-protector 1 -fstack-check -mdarwin-stkchk-strong-link -fblocks -fencode-extended-block-signature -fregister-global-dtors-with-atexit -fgnuc-version=4.2.1 -fcxx-exceptions -fexceptions -fmax-type-align=16 -fcommon -fcolor-diagnostics -vectorize-loops -vectorize-slp -clang-vendor-feature=+disableNonDependentMemberExprInCurrentInstantiation -fno-odr-hash-protocols -mllvm -disable-aligned-alloc-awareness=1 -o build/temp.macosx-11.4-x86_64-3.7/pparser.o -x c++ pparser.cpp clang -cc1 version 12.0.5 (clang-1205.0.22.11) default target x86_64-apple-darwin20.5.0 Yet my directory shows the correct symbolic links: ```~/Programming/git/Jupyter/Parsers  % ls -al /Library/Developer/CommandLineTools/SDKs                                                                                                                                       main total 0 drwxr-xr-x  7 root  wheel  224 Jul 12 19:31 . drwxr-xr-x  5 root  wheel  160 Jul 12 19:27 .. lrwxr-xr-x  1 root  wheel   14 Jul 12 19:31 MacOSX.sdk -> MacOSX11.3.sdk drwxr-xr-x  8 root  wheel  256 Jul 12 19:31 MacOSX10.15.sdk drwxr-xr-x  7 root  wheel  224 Nov 30  2020 MacOSX11.1.sdk drwxr-xr-x  7 root  wheel  224 Jul 12 19:31 MacOSX11.3.sdk lrwxr-xr-x  1 root  wheel   14 Jul 12 19:30 MacOSX11.sdk -> MacOSX11.3.sdk I'm trying to force some of the settings in the setup script: from distutils.core import setup, Extension class custom_build_ext(build_ext): def build_extensions(self): # Override the compiler executables. Importantly, this # removes the "default" compiler flags that would # otherwise get passed on to to the compiler, i.e., # distutils.sysconfig.get_var("CFLAGS"). self.compiler.set_executable("compiler_so", "/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/c++") self.compiler.set_executable("compiler_cxx", "/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/c++") self.compiler.set_executable("linker_so", "/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/c++") build_ext.build_extensions(self) [ setup(name='pparser', version='1.0', \ ext_modules=[Extension('pparser', ['pparser.cpp'], extra_compile_args = ["-Wno-nullability-completeness", "-Wno-undef-prefix", "-I/usr/local/opt/flex/include", "-I/usr/local/opt/bison/include", "-std=gnu++14", "-isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX11.3.sdk", "--verbose"], extra_link_args=["-flat_namespace"])]) ] I'm lost on what to try next.
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