Command Line Tools bundled Python 3.9.6 flagged by vulnerability scanner

We need guidance regarding the Python runtime bundled with Apple Command Line Tools.

Environment: macOS Tahoe 26.5.2 (25F84) Xcode 26.6 (17F113) Device type: Mac

Command Line Tools Python path: /Library/Developer/CommandLineTools/Library/Frameworks/Python3.framework/Versions/3.9/ Version confirmed locally with: /Library/Developer/CommandLineTools/Library/Frameworks/Python3.framework/Versions/3.9/bin/python3 --version Output: Python 3.9.6

Our vulnerability-management platform, Qualys, reports this Apple Command Line Tools Python runtime as vulnerable under QID 387170, referencing CVE-2022-4303 and CVE-2023-0286. The detection points to: /Library/Developer/CommandLineTools/Library/Frameworks/Python3.framework/Versions/3.9/Resources/Python.app

My understanding is that this runtime is bundled and managed by Apple as part of Command Line Tools, and that manually replacing or modifying this framework is not a supported remediation path. Installing a separate standalone Python version also does not remediate the finding at this Apple-managed path.

Could Apple or the community confirm the supported approach for this scenario? Specifically:

Is Python 3.9.6 intentionally bundled with the current Command Line Tools release for this macOS/Xcode version?

Has Apple applied security fixes or backports to this bundled Python runtime that are not reflected in the upstream Python version number?

Is updating Command Line Tools/Xcode the only supported remediation method for this component?

Is manually replacing or modifying the bundled Python framework unsupported?

Is there any known mitigation or official guidance for vulnerability-management exceptions while waiting for an Apple-provided update?

I have also filed this through Feedback Assistant: FB23893693.

Any official Apple guidance or reference to existing documentation would be very helpful, as we need to provide an auditable response to our internal security and audit teams.

This is a known problem with those scanning tools. A copy of Python sitting on the disk isn't an exploit risk.

Apple does sometimes update the bundled scripting tools included with Xcode, but there's no guarantee that an updated version will pass your security scans. In fact, the opposite is more likely true.

Command Line Tools bundled Python 3.9.6 flagged by vulnerability scanner
 
 
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